CRISPRone

CRISPRone report for GCA_003833585.1_ASM383358v1

♦ Seq 1: NSNI01000022.1 Pseudomonas aeruginosa strain PA-W29 IPC1291_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 67585 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 35732-45991 bp Zoom in on locus 1 x12 x17 CRISPR array Location: 35732-36421 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 35732-36421 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 36604-37167 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37171-38199 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 38210-39193 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39180-40484 bp Gene: COG1203:cas3 Type: Type-I Location: 40542-43772 bp Gene: cd09718:cas1 Type: universal Location: 43769-44743 bp CRISPR array Location: 45004-45991 bp Num of repeats: 17 Spacers: s12-s27 CRISPR array Location: 45004-45991 bp Num of repeats: 17 Spacers: s12-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 35732-36421 bp]: array | spacers
           [Locus range 45004-45991 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSNI01000001.1 Pseudomonas aeruginosa strain PA-W29 IPC1291_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 729148 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 415306-416834 bp Zoom in on locus 1 x26 CRISPR array Location: 415306-416834 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 415306-416834 bp Num of repeats: 26 Spacers: s1-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 415306-416834 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)