CRISPRone

CRISPRone report for GCA_003833665.1_ASM383366v1

♦ Seq 1: NSNP01000026.1 Pseudomonas aeruginosa strain PA-W10 IPC1284_26.1, whole genome shotgun sequence

⇒Summary: seq-len = 66990 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19242-29562 bp Zoom in on locus 1 x20 x10 CRISPR array Location: 19242-20411 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 19242-20411 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09718:cas1 Type: universal Location: 20671-21645 bp Gene: COG1203:cas3 Type: Type-I Location: 21642-24872 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 24930-26234 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26221-27204 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27215-28243 bp Gene: cd09739:cas6f Type: other Location: 28247-28810 bp CRISPR array Location: 28995-29562 bp Num of repeats: 10 Spacers: s20-s28 CRISPR array Location: 28995-29562 bp Num of repeats: 10 Spacers: s20-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 19242-20411 bp]: array | spacers
           [Locus range 28995-29562 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)