CRISPRone

CRISPRone report for GCA_003833685.1_ASM383368v1

♦ Seq 1: NSNT01000002.1 Pseudomonas aeruginosa strain PA-W1 IPC1280_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 894535 bp; # of CRISPR array = 2; # of cas gene = 10  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 582759-593894 bp 2 Locus 2: 846991-849193 bp Zoom in on locus 1 x9 x17 Zoom in on locus 2 CRISPR array Location: 582759-583277 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 582759-583277 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 584064-586763 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 587124-588680 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 588677-589207 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 589217-590359 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 590362-591024 bp Gene: pfam08798:cas6e Type: other Location: 590999-591610 bp Gene: cd09719:cas1 Type: universal Location: 591637-592527 bp Gene: pfam09707:cas2 Type: universal Location: 592524-592823 bp CRISPR array Location: 592888-593894 bp Num of repeats: 17 Spacers: s9-s24 CRISPR array Location: 592888-593894 bp Num of repeats: 17 Spacers: s9-s24 Gene: cd09693:cas5 Type: Type-I Location: 846991-847398 bp Gene: unk Type: unknown Location: 847426-848112 bp Gene: COG2378:WYL Type: other Location: 848222-849193 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 582759-583277 bp]: array | spacers
           [Locus range 592888-593894 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)