CRISPRone

CRISPRone report for GCA_003833765.1_ASM383376v1

♦ Seq 1: NSNQ01000011.1 Pseudomonas aeruginosa strain PA-W5 IPC1283_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 262549 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 51726-62238 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 51726-52244 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 51726-52244 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 53017-55698 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 55701-57269 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 57266-57796 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 57806-58948 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 58950-59612 bp Gene: pfam08798:cas6e Type: other Location: 59587-60198 bp Gene: cd09719:cas1 Type: universal Location: 60225-61115 bp Gene: pfam09707:cas2 Type: universal Location: 61112-61411 bp CRISPR array Location: 61476-62238 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 61476-62238 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 51726-52244 bp]: array | spacers
           [Locus range 61476-62238 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)