CRISPRone

CRISPRone report for GCA_003833955.1_ASM383395v1

♦ Seq 1: NSNA01000006.1 Pseudomonas aeruginosa strain PA-W42 IPC1299_6.1, whole genome shotgun sequence

⇒Summary: seq-len = 432819 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 305202-315714 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 305202-305720 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 305202-305720 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 306493-309174 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 309177-310745 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 310742-311272 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 311282-312424 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 312426-313088 bp Gene: pfam08798:cas6e Type: other Location: 313063-313674 bp Gene: cd09719:cas1 Type: universal Location: 313701-314591 bp Gene: pfam09707:cas2 Type: universal Location: 314588-314887 bp CRISPR array Location: 314952-315714 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 314952-315714 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 305202-305720 bp]: array | spacers
           [Locus range 314952-315714 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)