CRISPRone

CRISPRone report for GCA_003834005.1_ASM383400v1

♦ Seq 1: NSNB01000005.1 Pseudomonas aeruginosa strain PA-W39 IPC1298_5.1, whole genome shotgun sequence

⇒Summary: seq-len = 432718 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 305103-315615 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 305103-305621 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 305103-305621 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 306394-309075 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 309078-310646 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 310643-311173 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 311183-312325 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 312327-312989 bp Gene: pfam08798:cas6e Type: other Location: 312964-313575 bp Gene: cd09719:cas1 Type: universal Location: 313602-314492 bp Gene: pfam09707:cas2 Type: universal Location: 314489-314788 bp CRISPR array Location: 314853-315615 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 314853-315615 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 305103-305621 bp]: array | spacers
           [Locus range 314853-315615 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)