CRISPRone

CRISPRone report for GCA_003834015.1_ASM383401v1

♦ Seq 1: NSNH01000002.1 Pseudomonas aeruginosa strain PA-W31 IPC1292_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 755163 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3997-14508 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 3997-4758 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 3997-4758 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 4823-5122 bp Gene: cd09719:cas1 Type: universal Location: 5119-6009 bp Gene: pfam08798:cas6e Type: other Location: 6036-6575 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 6622-7284 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 7286-8428 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 8438-8968 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 8965-10533 bp Gene: cd09641:cas3HD Type: Type-I Location: 10536-13217 bp CRISPR array Location: 13991-14508 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 13991-14508 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3997-4758 bp]: array | spacers
           [Locus range 13991-14508 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)