CRISPRone

CRISPRone report for GCA_003834185.1_ASM383418v1

♦ Seq 1: NSNS01000001.1 Pseudomonas aeruginosa strain PA-W3 IPC1281_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 775156 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 564320-574832 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 564320-564838 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 564320-564838 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 565611-568292 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 568295-569863 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 569860-570390 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 570400-571542 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 571544-572206 bp Gene: pfam08798:cas6e Type: other Location: 572181-572792 bp Gene: cd09719:cas1 Type: universal Location: 572819-573709 bp Gene: pfam09707:cas2 Type: universal Location: 573706-574005 bp CRISPR array Location: 574070-574832 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 574070-574832 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 564320-564838 bp]: array | spacers
           [Locus range 574070-574832 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)