CRISPRone

CRISPRone report for GCA_003834285.1_ASM383428v1

♦ Seq 1: NSOJ01000004.1 Pseudomonas aeruginosa strain JYH12 IPC1223_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 621347 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 427831-439095 bp Zoom in on locus 1 x6 x22 CRISPR array Location: 427831-428166 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 427831-428166 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09641:cas3HD Type: Type-I Location: 428940-431648 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 432010-433578 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 433575-434105 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 434115-435257 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 435259-435921 bp Gene: pfam08798:cas6e Type: other Location: 435968-436507 bp Gene: cd09719:cas1 Type: universal Location: 436534-437424 bp Gene: pfam09707:cas2 Type: universal Location: 437421-437720 bp CRISPR array Location: 437785-439095 bp Num of repeats: 22 Spacers: s6-s26 CRISPR array Location: 437785-439095 bp Num of repeats: 22 Spacers: s6-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 427831-428166 bp]: array | spacers
           [Locus range 437785-439095 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)