CRISPRone

CRISPRone report for GCA_003834325.1_ASM383432v1

♦ Seq 1: NSOM01000021.1 Pseudomonas aeruginosa strain JYH6 IPC1217_21.1, whole genome shotgun sequence

⇒Summary: seq-len = 68088 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36773-48533 bp Zoom in on locus 1 x14 x40 CRISPR array Location: 36773-37582 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 36773-37582 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 37765-38328 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38332-39360 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39371-40354 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40341-41645 bp Gene: COG1203:cas3 Type: Type-I Location: 41703-44933 bp Gene: cd09718:cas1 Type: universal Location: 44930-45904 bp CRISPR array Location: 46166-48533 bp Num of repeats: 40 Spacers: s14-s52 CRISPR array Location: 46166-48533 bp Num of repeats: 40 Spacers: s14-s52 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36773-37582 bp]: array | spacers
           [Locus range 46166-48533 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)