CRISPRone

CRISPRone report for GCA_003834455.1_ASM383445v1

♦ Seq 1: NSOW01000003.1 Pseudomonas aeruginosa E2 IPC1165_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 724117 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 492796-493424 bp Zoom in on locus 1 x11 CRISPR array Location: 492796-493424 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 492796-493424 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 492796-493424 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSOW01000011.1 Pseudomonas aeruginosa E2 IPC1165_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 230003 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182027-192205 bp Zoom in on locus 1 x6 x16 CRISPR array Location: 182027-182355 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 182027-182355 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09718:cas1 Type: universal Location: 182606-183580 bp Gene: COG1203:cas3 Type: Type-I Location: 183577-186807 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 187218-188519 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 188506-189489 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 189500-190528 bp Gene: cd09739:cas6f Type: other Location: 190532-191095 bp CRISPR array Location: 191278-192205 bp Num of repeats: 16 Spacers: s6-s20 CRISPR array Location: 191278-192205 bp Num of repeats: 16 Spacers: s6-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182027-182355 bp]: array | spacers
           [Locus range 191278-192205 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)