CRISPRone

CRISPRone report for GCA_003834465.1_ASM383446v1

♦ Seq 1: NSOX01000025.1 Pseudomonas aeruginosa strain D9 3362 IPC1164_25.1, whole genome shotgun sequence

⇒Summary: seq-len = 100519 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36658-47102 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 36658-37766 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36658-37766 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 38026-39000 bp Gene: COG1203:cas3 Type: Type-I Location: 38997-42227 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42285-43589 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 43576-44559 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 44570-45598 bp Gene: cd09739:cas6f Type: other Location: 45602-46165 bp CRISPR array Location: 46415-47102 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 46415-47102 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36658-37766 bp]: array | spacers
           [Locus range 46415-47102 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)