CRISPRone

CRISPRone report for GCA_003834945.1_ASM383494v1

♦ Seq 1: NSQK01000020.1 Pseudomonas aeruginosa strain H3 IPC1060_20.1, whole genome shotgun sequence

⇒Summary: seq-len = 65130 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34176-45575 bp Zoom in on locus 1 x15 x33 CRISPR array Location: 34176-35044 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 34176-35044 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 35227-35790 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 35794-36822 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36833-37816 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 37803-39107 bp Gene: COG1203:cas3 Type: Type-I Location: 39165-42395 bp Gene: cd09718:cas1 Type: universal Location: 42392-43366 bp CRISPR array Location: 43628-45575 bp Num of repeats: 33 Spacers: s15-s46 CRISPR array Location: 43628-45575 bp Num of repeats: 33 Spacers: s15-s46 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34176-35044 bp]: array | spacers
           [Locus range 43628-45575 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)