CRISPRone

CRISPRone report for GCA_003834985.1_ASM383498v1

♦ Seq 1: NSQO01000007.1 Pseudomonas aeruginosa strain D1 IPC1045_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 372631 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8452-18964 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8452-8970 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8452-8970 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9743-12424 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12427-13995 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13992-14522 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14532-15674 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15676-16338 bp Gene: pfam08798:cas6e Type: other Location: 16313-16924 bp Gene: cd09719:cas1 Type: universal Location: 16951-17841 bp Gene: pfam09707:cas2 Type: universal Location: 17838-18137 bp CRISPR array Location: 18202-18964 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18202-18964 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8452-8970 bp]: array | spacers
           [Locus range 18202-18964 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)