CRISPRone

CRISPRone report for GCA_003835095.1_ASM383509v1

♦ Seq 1: NSQU01000018.1 Pseudomonas aeruginosa strain 020MIC IPC1033_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 84140 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21795-32306 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 21795-22556 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 21795-22556 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 22621-22920 bp Gene: cd09719:cas1 Type: universal Location: 22917-23807 bp Gene: pfam08798:cas6e Type: other Location: 23834-24373 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 24420-25082 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 25084-26226 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 26236-26766 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 26763-28331 bp Gene: cd09641:cas3HD Type: Type-I Location: 28334-31015 bp CRISPR array Location: 31789-32306 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 31789-32306 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21795-22556 bp]: array | spacers
           [Locus range 31789-32306 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)