CRISPRone

CRISPRone report for GCA_003835155.1_ASM383515v1

♦ Seq 1: NSQV01000021.1 Pseudomonas aeruginosa strain DUN-018 IPC1031_21.1, whole genome shotgun sequence

⇒Summary: seq-len = 97382 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65768-77827 bp Zoom in on locus 1 x19 x40 CRISPR array Location: 65768-66876 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 65768-66876 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 67059-67622 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 67626-68654 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 68665-69648 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 69635-70939 bp Gene: COG1203:cas3 Type: Type-I Location: 70997-74227 bp Gene: cd09718:cas1 Type: universal Location: 74224-75198 bp CRISPR array Location: 75460-77827 bp Num of repeats: 40 Spacers: s19-s57 CRISPR array Location: 75460-77827 bp Num of repeats: 40 Spacers: s19-s57 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 65768-66876 bp]: array | spacers
           [Locus range 75460-77827 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)