CRISPRone

CRISPRone report for GCA_003835185.1_ASM383518v1

♦ Seq 1: NSRD01000023.1 Pseudomonas aeruginosa strain DUN-006 IPC1005_23.1, whole genome shotgun sequence

⇒Summary: seq-len = 81115 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33591-44035 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 33591-34699 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 33591-34699 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 34959-35933 bp Gene: COG1203:cas3 Type: Type-I Location: 35930-39160 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39218-40522 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40509-41492 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41503-42531 bp Gene: cd09739:cas6f Type: other Location: 42535-43098 bp CRISPR array Location: 43348-44035 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 43348-44035 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33591-34699 bp]: array | spacers
           [Locus range 43348-44035 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)