CRISPRone

CRISPRone report for GCA_003835245.1_ASM383524v1

♦ Seq 1: NSRF01000024.1 Pseudomonas aeruginosa strain DUN-003B IPC995_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 48547 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37777-48033 bp Zoom in on locus 1 x14 x15 CRISPR array Location: 37777-38585 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 37777-38585 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 38768-39331 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39335-40363 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40374-41357 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41344-42648 bp Gene: COG1203:cas3 Type: Type-I Location: 42706-45936 bp Gene: cd09718:cas1 Type: universal Location: 45933-46907 bp CRISPR array Location: 47165-48033 bp Num of repeats: 15 Spacers: s14-s27 CRISPR array Location: 47165-48033 bp Num of repeats: 15 Spacers: s14-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37777-38585 bp]: array | spacers
           [Locus range 47165-48033 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSRF01000017.1 Pseudomonas aeruginosa strain DUN-003B IPC995_17.1, whole genome shotgun sequence

⇒Summary: seq-len = 101620 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 218-1386 bp Zoom in on locus 1 x20 CRISPR array Location: 218-1386 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 218-1386 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 218-1386 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)