CRISPRone

CRISPRone report for GCA_003835285.1_ASM383528v1

♦ Seq 1: NSRG01000014.1 Pseudomonas aeruginosa strain DUN-002C IPC991_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 208836 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 690-1199 bp Zoom in on locus 1 x9 CRISPR array Location: 690-1199 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 690-1199 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 690-1199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSRG01000024.1 Pseudomonas aeruginosa strain DUN-002C IPC991_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 50902 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 304-12291 bp Zoom in on locus 1 x24 x28 CRISPR array Location: 304-1713 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 304-1713 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09718:cas1 Type: universal Location: 1973-2947 bp Gene: COG1203:cas3 Type: Type-I Location: 2944-6174 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6585-7886 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7873-8856 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8867-9895 bp Gene: cd09739:cas6f Type: other Location: 9899-10462 bp CRISPR array Location: 10647-12291 bp Num of repeats: 28 Spacers: s24-s50 CRISPR array Location: 10647-12291 bp Num of repeats: 28 Spacers: s24-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 304-1713 bp]: array | spacers
           [Locus range 10647-12291 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)