CRISPRone

CRISPRone report for GCA_003835335.1_ASM383533v1

♦ Seq 1: NSOL01000003.1 Pseudomonas aeruginosa strain JYH8 IPC1219_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 618936 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 299222-309918 bp Zoom in on locus 1 x12 x13 CRISPR array Location: 299222-299922 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 299222-299922 bp Num of repeats: 12 Spacers: s1-s11 Gene: pfam09707:cas2 Type: universal Location: 299987-300286 bp Gene: cd09719:cas1 Type: universal Location: 300283-301173 bp Gene: pfam08798:cas6e Type: other Location: 301200-301739 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 301786-302448 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 302450-303592 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 303602-304132 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 304129-305697 bp Gene: cd09641:cas3HD Type: Type-I Location: 305700-308381 bp CRISPR array Location: 309158-309918 bp Num of repeats: 13 Spacers: s12-s23 CRISPR array Location: 309158-309918 bp Num of repeats: 13 Spacers: s12-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 299222-299922 bp]: array | spacers
           [Locus range 309158-309918 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)