CRISPRone

CRISPRone report for GCA_003835485.1_ASM383548v1

♦ Seq 1: NSOO01000026.1 Pseudomonas aeruginosa strain HB159 IPC1190_26.1, whole genome shotgun sequence

⇒Summary: seq-len = 51336 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36943-49844 bp Zoom in on locus 1 x28 x45 CRISPR array Location: 36943-38591 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 36943-38591 bp Num of repeats: 28 Spacers: s1-s27 Gene: cd09739:cas6f Type: other Location: 38774-39337 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39341-40369 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40380-41363 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41350-42654 bp Gene: COG1203:cas3 Type: Type-I Location: 42712-45942 bp Gene: cd09718:cas1 Type: universal Location: 45939-46913 bp CRISPR array Location: 47175-49844 bp Num of repeats: 45 Spacers: s28-s71 CRISPR array Location: 47175-49844 bp Num of repeats: 45 Spacers: s28-s71 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36943-38591 bp]: array | spacers
           [Locus range 47175-49844 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)