CRISPRone

CRISPRone report for GCA_003835665.1_ASM383566v1

♦ Seq 1: NSQQ01000029.1 Pseudomonas aeruginosa strain B2 IPC1040_29.1, whole genome shotgun sequence

⇒Summary: seq-len = 66669 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22206-32650 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 22206-23314 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 22206-23314 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 23574-24548 bp Gene: COG1203:cas3 Type: Type-I Location: 24545-27775 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27833-29137 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29124-30107 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30118-31146 bp Gene: cd09739:cas6f Type: other Location: 31150-31713 bp CRISPR array Location: 31963-32650 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 31963-32650 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22206-23314 bp]: array | spacers
           [Locus range 31963-32650 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)