CRISPRone

CRISPRone report for GCA_003835775.1_ASM383577v1

♦ Seq 1: NSRA01000002.1 Pseudomonas aeruginosa strain DUN-009B IPC1014_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 1003606 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 309284-320468 bp Zoom in on locus 1 x19 x14 CRISPR array Location: 309284-310412 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 309284-310412 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 310477-310776 bp Gene: cd09719:cas1 Type: universal Location: 310773-311663 bp Gene: pfam08798:cas6e Type: other Location: 311690-312229 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 312276-312938 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 312940-314082 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 314092-314622 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 314619-316187 bp Gene: cd09641:cas3HD Type: Type-I Location: 316190-318871 bp CRISPR array Location: 319645-320468 bp Num of repeats: 14 Spacers: s19-s31 CRISPR array Location: 319645-320468 bp Num of repeats: 14 Spacers: s19-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 309284-310412 bp]: array | spacers
           [Locus range 319645-320468 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)