CRISPRone

CRISPRone report for GCA_003835915.1_ASM383591v1

♦ Seq 1: NSRR01000003.1 Pseudomonas aeruginosa strain U454A IPC977_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 652441 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182402-193159 bp Zoom in on locus 1 x19 x7 CRISPR array Location: 182402-183530 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 182402-183530 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 183595-183894 bp Gene: cd09719:cas1 Type: universal Location: 183891-184781 bp Gene: pfam08798:cas6e Type: other Location: 184808-185347 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 185394-186056 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 186058-187200 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 187210-187740 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 187737-189305 bp Gene: unk Type: unknown Location: 189308-190018 bp Gene: cd09641:cas3HD Type: Type-I Location: 190037-191989 bp CRISPR array Location: 192765-193159 bp Num of repeats: 7 Spacers: s19-s24 CRISPR array Location: 192765-193159 bp Num of repeats: 7 Spacers: s19-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182402-183530 bp]: array | spacers
           [Locus range 192765-193159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)