CRISPRone

CRISPRone report for GCA_003836035.1_ASM383603v1

♦ Seq 1: NSRT01000022.1 Pseudomonas aeruginosa strain U435 IPC971_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 51076 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 304-12471 bp Zoom in on locus 1 x26 x29 CRISPR array Location: 304-1833 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 304-1833 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 2093-3067 bp Gene: COG1203:cas3 Type: Type-I Location: 3064-6294 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6705-8006 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7993-8976 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8987-10015 bp Gene: cd09739:cas6f Type: other Location: 10019-10582 bp CRISPR array Location: 10767-12471 bp Num of repeats: 29 Spacers: s26-s53 CRISPR array Location: 10767-12471 bp Num of repeats: 29 Spacers: s26-s53 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 304-1833 bp]: array | spacers
           [Locus range 10767-12471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSRT01000012.1 Pseudomonas aeruginosa strain U435 IPC971_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 208803 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 690-1199 bp Zoom in on locus 1 x9 CRISPR array Location: 690-1199 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 690-1199 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 690-1199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)