CRISPRone

CRISPRone report for GCA_003836065.1_ASM383606v1

♦ Seq 1: NSSF01000021.1 Pseudomonas aeruginosa strain MSB3405 IPC914_21.1, whole genome shotgun sequence

⇒Summary: seq-len = 68386 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36892-48831 bp Zoom in on locus 1 x19 x38 CRISPR array Location: 36892-38000 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36892-38000 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 38183-38746 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38750-39778 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39789-40772 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40759-42063 bp Gene: COG1203:cas3 Type: Type-I Location: 42121-45351 bp Gene: cd09718:cas1 Type: universal Location: 45348-46322 bp CRISPR array Location: 46584-48831 bp Num of repeats: 38 Spacers: s19-s55 CRISPR array Location: 46584-48831 bp Num of repeats: 38 Spacers: s19-s55 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36892-38000 bp]: array | spacers
           [Locus range 46584-48831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSSF01000009.1 Pseudomonas aeruginosa strain MSB3405 IPC914_9.1, whole genome shotgun sequence

⇒Summary: seq-len = 284289 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 158115-158573 bp Zoom in on locus 1 x8 CRISPR array Location: 158115-158573 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 158115-158573 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 158115-158573 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)