CRISPRone

CRISPRone report for GCA_003836075.1_ASM383607v1

♦ Seq 1: NSRU01000008.1 Pseudomonas aeruginosa strain U421 IPC965_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 388811 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 275647-286161 bp Zoom in on locus 1 x14 x6 CRISPR array Location: 275647-276468 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 275647-276468 bp Num of repeats: 14 Spacers: s1-s13 Gene: pfam09707:cas2 Type: universal Location: 276533-276832 bp Gene: cd09719:cas1 Type: universal Location: 276829-277719 bp Gene: pfam08798:cas6e Type: other Location: 277746-278285 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 278332-278994 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 278996-280138 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 280148-280678 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 280675-282243 bp Gene: cd09641:cas3HD Type: Type-I Location: 282246-284927 bp CRISPR array Location: 285826-286161 bp Num of repeats: 6 Spacers: s14-s18 CRISPR array Location: 285826-286161 bp Num of repeats: 6 Spacers: s14-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 275647-276468 bp]: array | spacers
           [Locus range 285826-286161 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSRU01000003.1 Pseudomonas aeruginosa strain U421 IPC965_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 498497 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 345-1513 bp Zoom in on locus 1 x20 CRISPR array Location: 345-1513 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 345-1513 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 345-1513 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)