CRISPRone

CRISPRone report for GCA_003836135.1_ASM383613v1

♦ Seq 1: NSSL01000006.1 Pseudomonas aeruginosa strain PMM38 IPC888_6.1, whole genome shotgun sequence

⇒Summary: seq-len = 282203 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 58180-68694 bp Zoom in on locus 1 x10 x12 CRISPR array Location: 58180-58758 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 58180-58758 bp Num of repeats: 10 Spacers: s1-s9 Gene: pfam09707:cas2 Type: universal Location: 58823-59122 bp Gene: cd09719:cas1 Type: universal Location: 59119-60009 bp Gene: pfam08798:cas6e Type: other Location: 60036-60575 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 60622-61284 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 61286-62428 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 62438-62968 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 62965-64533 bp Gene: cd09641:cas3HD Type: Type-I Location: 64536-67217 bp CRISPR array Location: 67993-68694 bp Num of repeats: 12 Spacers: s10-s20 CRISPR array Location: 67993-68694 bp Num of repeats: 12 Spacers: s10-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 58180-58758 bp]: array | spacers
           [Locus range 67993-68694 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)