CRISPRone

CRISPRone report for GCA_003836305.1_ASM383630v1

♦ Seq 1: NSSY01000001.1 Pseudomonas aeruginosa strain Aa249 IPC858_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 870291 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207396-217907 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 207396-208157 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 207396-208157 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 208222-208521 bp Gene: cd09719:cas1 Type: universal Location: 208518-209408 bp Gene: pfam08798:cas6e Type: other Location: 209435-209974 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 210021-210683 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 210685-211827 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 211837-212367 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 212364-213932 bp Gene: cd09641:cas3HD Type: Type-I Location: 213935-216616 bp CRISPR array Location: 217390-217907 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 217390-217907 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 207396-208157 bp]: array | spacers
           [Locus range 217390-217907 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSSY01000024.1 Pseudomonas aeruginosa strain Aa249 IPC858_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 103378 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19851-26639 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 19851-23072 bp Gene: pfam13280:WYL Type: other Location: 23085-23993 bp Gene: unk Type: unknown Location: 24273-25163 bp Gene: unk Type: unknown Location: 25298-25615 bp Gene: mkCas0115:csx3 Type: other Location: 25608-26639 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)