CRISPRone

CRISPRone report for GCA_003836385.1_ASM383638v1

♦ Seq 1: NSTE01000013.1 Pseudomonas aeruginosa strain LiA63_2006 IPC790_13.1, whole genome shotgun sequence

⇒Summary: seq-len = 196064 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13613-23359 bp Zoom in on locus 1 x7 x12 CRISPR array Location: 13613-14007 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 13613-14007 bp Num of repeats: 7 Spacers: s1-s6 Gene: pfam09707:cas2 Type: universal Location: 14072-14371 bp Gene: cd09719:cas1 Type: universal Location: 14368-14679 bp Gene: pfam08798:cas6e Type: other Location: 14706-15245 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15292-15954 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 15956-17098 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 17108-17638 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 17635-19203 bp Gene: cd09641:cas3HD Type: Type-I Location: 19206-21887 bp CRISPR array Location: 22660-23359 bp Num of repeats: 12 Spacers: s7-s17 CRISPR array Location: 22660-23359 bp Num of repeats: 12 Spacers: s7-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 13613-14007 bp]: array | spacers
           [Locus range 22660-23359 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)