CRISPRone

CRISPRone report for GCA_003836405.1_ASM383640v1

♦ Seq 1: NSTG01000009.1 Pseudomonas aeruginosa strain LiA18_2003 IPC786_9.1, whole genome shotgun sequence

⇒Summary: seq-len = 221401 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8789-19301 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8789-9307 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8789-9307 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 10080-12761 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12764-14332 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 14329-14859 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14869-16011 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 16013-16675 bp Gene: pfam08798:cas6e Type: other Location: 16650-17261 bp Gene: cd09719:cas1 Type: universal Location: 17288-18178 bp Gene: pfam09707:cas2 Type: universal Location: 18175-18474 bp CRISPR array Location: 18539-19301 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18539-19301 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8789-9307 bp]: array | spacers
           [Locus range 18539-19301 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)