CRISPRone

CRISPRone report for GCA_003836455.1_ASM383645v1

♦ Seq 1: NSTH01000010.1 Pseudomonas aeruginosa strain LiA179_2006 IPC785_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 325756 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 202047-212499 bp Zoom in on locus 1 x14 x7 CRISPR array Location: 202047-202870 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 202047-202870 bp Num of repeats: 14 Spacers: s1-s13 Gene: pfam09707:cas2 Type: universal Location: 202935-203234 bp Gene: cd09719:cas1 Type: universal Location: 203231-204121 bp Gene: pfam08798:cas6e Type: other Location: 204148-204687 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 204734-205396 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 205398-206540 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 206550-207080 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 207077-208645 bp Gene: cd09641:cas3HD Type: Type-I Location: 208648-211329 bp CRISPR array Location: 212105-212499 bp Num of repeats: 7 Spacers: s14-s19 CRISPR array Location: 212105-212499 bp Num of repeats: 7 Spacers: s14-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 202047-202870 bp]: array | spacers
           [Locus range 212105-212499 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)