CRISPRone

CRISPRone report for GCA_003836565.1_ASM383656v1

♦ Seq 1: NSTQ01000021.1 Pseudomonas aeruginosa strain Jp54 IPC747_21.1, whole genome shotgun sequence

⇒Summary: seq-len = 79230 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34939-44993 bp Zoom in on locus 1 x16 x9 CRISPR array Location: 34939-35867 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 34939-35867 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 36050-36613 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36617-37645 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 37656-38639 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38626-39930 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 39988-41145 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 41088-43253 bp Gene: cd09718:cas1 Type: universal Location: 43250-44224 bp CRISPR array Location: 44485-44993 bp Num of repeats: 9 Spacers: s16-s23 CRISPR array Location: 44485-44993 bp Num of repeats: 9 Spacers: s16-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34939-35867 bp]: array | spacers
           [Locus range 44485-44993 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSTQ01000011.1 Pseudomonas aeruginosa strain Jp54 IPC747_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 294875 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 276050-286406 bp Zoom in on locus 1 x17 x12 CRISPR array Location: 276050-277054 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 276050-277054 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 277119-277418 bp Gene: cd09719:cas1 Type: universal Location: 277415-277726 bp Gene: pfam08798:cas6e Type: other Location: 277753-278292 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 278339-279001 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 279003-280145 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 280155-280685 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 280682-282250 bp Gene: cd09641:cas3HD Type: Type-I Location: 282253-284934 bp CRISPR array Location: 285707-286406 bp Num of repeats: 12 Spacers: s17-s27 CRISPR array Location: 285707-286406 bp Num of repeats: 12 Spacers: s17-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 276050-277054 bp]: array | spacers
           [Locus range 285707-286406 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)