CRISPRone

CRISPRone report for GCA_003836635.1_ASM383663v1

♦ Seq 1: NSTY01000024.1 Pseudomonas aeruginosa strain CPHL8058 IPC733_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 101157 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 64315-76374 bp Zoom in on locus 1 x19 x40 CRISPR array Location: 64315-65423 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 64315-65423 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 65606-66169 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 66173-67201 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 67212-68195 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 68182-69486 bp Gene: COG1203:cas3 Type: Type-I Location: 69544-72774 bp Gene: cd09718:cas1 Type: universal Location: 72771-73745 bp CRISPR array Location: 74007-76374 bp Num of repeats: 40 Spacers: s19-s57 CRISPR array Location: 74007-76374 bp Num of repeats: 40 Spacers: s19-s57 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 64315-65423 bp]: array | spacers
           [Locus range 74007-76374 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)