CRISPRone

CRISPRone report for GCA_003836685.1_ASM383668v1

♦ Seq 1: NSTT01000009.1 Pseudomonas aeruginosa strain Tu61 IPC740_9.1, whole genome shotgun sequence

⇒Summary: seq-len = 278601 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 210149-220603 bp Zoom in on locus 1 x9 x12 CRISPR array Location: 210149-210667 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 210149-210667 bp Num of repeats: 9 Spacers: s1-s8 Gene: pfam09707:cas2 Type: universal Location: 210805-211032 bp Gene: cd09719:cas1 Type: universal Location: 211029-211919 bp Gene: pfam08798:cas6e Type: other Location: 211946-212485 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 212532-213194 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 213196-214338 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 214348-214878 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 214875-216443 bp Gene: cd09641:cas3HD Type: Type-I Location: 216446-219127 bp CRISPR array Location: 219904-220603 bp Num of repeats: 12 Spacers: s9-s19 CRISPR array Location: 219904-220603 bp Num of repeats: 12 Spacers: s9-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 210149-210667 bp]: array | spacers
           [Locus range 219904-220603 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)