CRISPRone

CRISPRone report for GCA_003836745.1_ASM383674v1

♦ Seq 1: NSUC01000016.1 Pseudomonas aeruginosa strain CPHL1999 IPC728_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 95466 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65892-75911 bp Zoom in on locus 1 x19 x6 CRISPR array Location: 65892-67000 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 65892-67000 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 67183-67746 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 67750-68778 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 68789-69772 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 69759-71063 bp Gene: COG1203:cas3 Type: Type-I Location: 71121-74351 bp Gene: cd09718:cas1 Type: universal Location: 74348-75322 bp CRISPR array Location: 75584-75911 bp Num of repeats: 6 Spacers: s19-s23 CRISPR array Location: 75584-75911 bp Num of repeats: 6 Spacers: s19-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 65892-67000 bp]: array | spacers
           [Locus range 75584-75911 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)