CRISPRone

CRISPRone report for GCA_003836765.1_ASM383676v1

♦ Seq 1: NSUF01000022.1 Pseudomonas aeruginosa strain IDEXX_Canine4 IPC723_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 81892 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34463-44907 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 34463-35571 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 34463-35571 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 35831-36805 bp Gene: COG1203:cas3 Type: Type-I Location: 36802-40032 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40090-41394 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41381-42364 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 42375-43403 bp Gene: cd09739:cas6f Type: other Location: 43407-43970 bp CRISPR array Location: 44220-44907 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 44220-44907 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34463-35571 bp]: array | spacers
           [Locus range 44220-44907 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)