CRISPRone

CRISPRone report for GCA_003836805.1_ASM383680v1

♦ Seq 1: NSUP01000017.1 Pseudomonas aeruginosa strain SWPA15J=NSWPA15a IPC699_17.1, whole genome shotgun sequence

⇒Summary: seq-len = 78973 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37735-48220 bp Zoom in on locus 1 x14 x2 x15 CRISPR array Location: 37735-38543 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 37735-38543 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 38792-39355 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39359-40387 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40398-41381 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41368-42672 bp Gene: COG1203:cas3 Type: Type-I Location: 42730-45960 bp Gene: cd09718:cas1 Type: universal Location: 45957-46931 bp CRISPR array Location: 47192-47279 bp Num of repeats: 2 Spacers: s14-s14 CRISPR array Location: 47192-47279 bp Num of repeats: 2 Spacers: s14-s14 CRISPR array Location: 47352-48220 bp Num of repeats: 15 Spacers: s15-s28 CRISPR array Location: 47352-48220 bp Num of repeats: 15 Spacers: s15-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37735-38543 bp]: array | spacers
           [Locus range 47192-47279 bp]: array | spacers
           [Locus range 47352-48220 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)