CRISPRone

CRISPRone report for GCA_003836865.1_ASM383686v1

♦ Seq 1: NSUS01000016.1 Pseudomonas aeruginosa strain A22 IPC695_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 70128 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21311-31633 bp Zoom in on locus 1 x14 x16 CRISPR array Location: 21311-22119 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 21311-22119 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 22383-23357 bp Gene: COG1203:cas3 Type: Type-I Location: 23354-26584 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26642-27946 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27933-28916 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28927-29955 bp Gene: cd09739:cas6f Type: other Location: 29959-30522 bp CRISPR array Location: 30705-31633 bp Num of repeats: 16 Spacers: s14-s28 CRISPR array Location: 30705-31633 bp Num of repeats: 16 Spacers: s14-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21311-22119 bp]: array | spacers
           [Locus range 30705-31633 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSUS01000001.1 Pseudomonas aeruginosa strain A22 IPC695_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 942271 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 508334-509142 bp Zoom in on locus 1 x14 CRISPR array Location: 508334-509142 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 508334-509142 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 508334-509142 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)