CRISPRone

CRISPRone report for GCA_003836875.1_ASM383687v1

♦ Seq 1: NSUU01000014.1 Pseudomonas aeruginosa strain A17 IPC693_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 182085 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12680-23253 bp Zoom in on locus 1 x9 x14 CRISPR array Location: 12680-13198 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 12680-13198 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 13971-16652 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 16655-18223 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 18220-18750 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 18760-19902 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 19904-20566 bp Gene: pfam08798:cas6e Type: other Location: 20541-21152 bp Gene: cd09719:cas1 Type: universal Location: 21179-22069 bp Gene: pfam09707:cas2 Type: universal Location: 22066-22365 bp CRISPR array Location: 22430-23253 bp Num of repeats: 14 Spacers: s9-s21 CRISPR array Location: 22430-23253 bp Num of repeats: 14 Spacers: s9-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12680-13198 bp]: array | spacers
           [Locus range 22430-23253 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)