CRISPRone

CRISPRone report for GCA_003836965.1_ASM383696v1

♦ Seq 1: NSUY01000002.1 Pseudomonas aeruginosa strain A10 IPC689_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 734897 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 273218-283574 bp Zoom in on locus 1 x17 x12 CRISPR array Location: 273218-274222 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 273218-274222 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 274287-274586 bp Gene: cd09719:cas1 Type: universal Location: 274583-274894 bp Gene: pfam08798:cas6e Type: other Location: 274921-275460 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 275507-276169 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 276171-277313 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 277323-277853 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 277850-279418 bp Gene: cd09641:cas3HD Type: Type-I Location: 279421-282102 bp CRISPR array Location: 282875-283574 bp Num of repeats: 12 Spacers: s17-s27 CRISPR array Location: 282875-283574 bp Num of repeats: 12 Spacers: s17-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 273218-274222 bp]: array | spacers
           [Locus range 282875-283574 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSUY01000015.1 Pseudomonas aeruginosa strain A10 IPC689_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 221572 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 172992-184189 bp Zoom in on locus 1 x20 x23 CRISPR array Location: 172992-174161 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 172992-174161 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09718:cas1 Type: universal Location: 174521-175495 bp Gene: COG1203:cas3 Type: Type-I Location: 175492-178722 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 178780-180084 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 180071-181054 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 181065-182093 bp Gene: cd09739:cas6f Type: other Location: 182097-182660 bp CRISPR array Location: 182843-184189 bp Num of repeats: 23 Spacers: s20-s41 CRISPR array Location: 182843-184189 bp Num of repeats: 23 Spacers: s20-s41 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 172992-174161 bp]: array | spacers
           [Locus range 182843-184189 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)