CRISPRone

CRISPRone report for GCA_003837005.1_ASM383700v1

♦ Seq 1: NSVC01000008.1 Pseudomonas aeruginosa strain Co399645 IPC665_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 272330 bp; # of CRISPR array = 0; # of cas gene = 4  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 199484-212396 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 199484-200353 bp Gene: mkCas0115:csx3 Type: other Location: 200624-206554 bp Gene: unk Type: unknown Location: 206778-207278 bp Gene: unk Type: unknown Location: 207455-207901 bp Gene: cd09639:cas3 Type: Type-I Location: 208385-210745 bp Gene: cd09639:cas3 Type: Type-I Location: 211872-212396 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSVC01000004.1 Pseudomonas aeruginosa strain Co399645 IPC665_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 450736 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 297539-308171 bp Zoom in on locus 1 x15 x9 CRISPR array Location: 297539-298422 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 297539-298422 bp Num of repeats: 15 Spacers: s1-s14 Gene: pfam09707:cas2 Type: universal Location: 298487-298786 bp Gene: cd09719:cas1 Type: universal Location: 298783-299673 bp Gene: pfam08798:cas6e Type: other Location: 299700-300239 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 300286-300948 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 300950-302092 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 302102-302632 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 302629-304197 bp Gene: cd09641:cas3HD Type: Type-I Location: 304200-306881 bp CRISPR array Location: 307655-308171 bp Num of repeats: 9 Spacers: s15-s22 CRISPR array Location: 307655-308171 bp Num of repeats: 9 Spacers: s15-s22 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 297539-298422 bp]: array | spacers
           [Locus range 307655-308171 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)