CRISPRone

CRISPRone report for GCA_003837025.1_ASM383702v1

♦ Seq 1: NSUV01000006.1 Pseudomonas aeruginosa strain A15 IPC692_6.1, whole genome shotgun sequence

⇒Summary: seq-len = 396163 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 252303-252690 bp Zoom in on locus 1 x7 CRISPR array Location: 252303-252690 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 252303-252690 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 252303-252690 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSUV01000003.1 Pseudomonas aeruginosa strain A15 IPC692_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 720441 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 679539-689802 bp Zoom in on locus 1 x19 x9 CRISPR array Location: 679539-680648 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 679539-680648 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 680831-681394 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 681398-682426 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 682437-683483 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 683470-684774 bp Gene: COG1203:cas3 Type: Type-I Location: 684832-688062 bp Gene: cd09718:cas1 Type: universal Location: 688059-689033 bp CRISPR array Location: 689295-689802 bp Num of repeats: 9 Spacers: s19-s26 CRISPR array Location: 689295-689802 bp Num of repeats: 9 Spacers: s19-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 679539-680648 bp]: array | spacers
           [Locus range 689295-689802 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSUV01000007.1 Pseudomonas aeruginosa strain A15 IPC692_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 348400 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 51639-51846 bp Zoom in on locus 1 x4 CRISPR array Location: 51639-51846 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 51639-51846 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 51639-51846 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)