CRISPRone

CRISPRone report for GCA_003837185.1_ASM383718v1

♦ Seq 1: NSSB01000011.1 Pseudomonas aeruginosa strain U0306 IPC934_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 248391 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 198043-209850 bp Zoom in on locus 1 x23 x26 CRISPR array Location: 198043-199392 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 198043-199392 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 199652-200626 bp Gene: COG1203:cas3 Type: Type-I Location: 200623-203853 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 204264-205565 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 205552-206535 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 206546-207574 bp Gene: cd09739:cas6f Type: other Location: 207578-208141 bp CRISPR array Location: 208326-209850 bp Num of repeats: 26 Spacers: s23-s47 CRISPR array Location: 208326-209850 bp Num of repeats: 26 Spacers: s23-s47 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 198043-199392 bp]: array | spacers
           [Locus range 208326-209850 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSSB01000003.1 Pseudomonas aeruginosa strain U0306 IPC934_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 648905 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207585-208213 bp Zoom in on locus 1 x11 CRISPR array Location: 207585-208213 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 207585-208213 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207585-208213 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)