CRISPRone

CRISPRone report for GCA_003837435.1_ASM383743v1

♦ Seq 1: NSTD01000003.1 Pseudomonas aeruginosa strain LiA91_2004 IPC796_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 450217 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132307-145079 bp Zoom in on locus 1 x41 x18 CRISPR array Location: 132307-134777 bp Num of repeats: 41 Spacers: s1-s40 CRISPR array Location: 132307-134777 bp Num of repeats: 41 Spacers: s1-s40 Gene: pfam09707:cas2 Type: universal Location: 134842-135141 bp Gene: cd09719:cas1 Type: universal Location: 135138-136028 bp Gene: pfam08798:cas6e Type: other Location: 136055-136594 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 136641-137303 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 137305-138447 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 138457-138987 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 138984-140552 bp Gene: cd09641:cas3HD Type: Type-I Location: 140555-143236 bp CRISPR array Location: 144011-145079 bp Num of repeats: 18 Spacers: s41-s57 CRISPR array Location: 144011-145079 bp Num of repeats: 18 Spacers: s41-s57 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 132307-134777 bp]: array | spacers
           [Locus range 144011-145079 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)