CRISPRone

CRISPRone report for GCA_003837505.1_ASM383750v1

♦ Seq 1: NSTP01000022.1 Pseudomonas aeruginosa strain Jp97 IPC749_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 46501 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1146-12431 bp Zoom in on locus 1 x19 x26 CRISPR array Location: 1146-2254 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1146-2254 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 2515-3489 bp Gene: COG1203:cas3 Type: Type-I Location: 3486-6716 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6774-8078 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8065-9048 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9059-10087 bp Gene: cd09739:cas6f Type: other Location: 10091-10654 bp CRISPR array Location: 10904-12431 bp Num of repeats: 26 Spacers: s19-s43 CRISPR array Location: 10904-12431 bp Num of repeats: 26 Spacers: s19-s43 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1146-2254 bp]: array | spacers
           [Locus range 10904-12431 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSTP01000004.1 Pseudomonas aeruginosa strain Jp97 IPC749_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 500297 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 149029-158648 bp Zoom in on locus 1 x28 Gene: cd09641:cas3HD Type: Type-I Location: 149029-151263 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 151313-151987 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 151984-153777 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 153774-154643 bp Gene: pfam01930:cas4 Type: Type-I Location: 154662-155294 bp Gene: cd09721:cas1 Type: universal Location: 155298-156338 bp Gene: cd09725:cas2 Type: universal Location: 156348-156638 bp CRISPR array Location: 156820-158648 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 156820-158648 bp Num of repeats: 28 Spacers: s1-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 156820-158648 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)