CRISPRone

CRISPRone report for GCA_003837565.1_ASM383756v1

♦ Seq 1: NSUD01000001.1 Pseudomonas aeruginosa strain CPHL950 IPC727_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 858151 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 222096-222303 bp Zoom in on locus 1 x4 CRISPR array Location: 222096-222303 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 222096-222303 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 222096-222303 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSUD01000017.1 Pseudomonas aeruginosa strain CPHL950 IPC727_17.1, whole genome shotgun sequence

⇒Summary: seq-len = 92601 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29153-39580 bp Zoom in on locus 1 x14 x18 CRISPR array Location: 29153-29961 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 29153-29961 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 30212-31186 bp Gene: COG1203:cas3 Type: Type-I Location: 31183-34413 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34471-35775 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35762-36745 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36756-37784 bp Gene: cd09739:cas6f Type: other Location: 37788-38351 bp CRISPR array Location: 38536-39580 bp Num of repeats: 18 Spacers: s14-s30 CRISPR array Location: 38536-39580 bp Num of repeats: 18 Spacers: s14-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 29153-29961 bp]: array | spacers
           [Locus range 38536-39580 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)