CRISPRone

CRISPRone report for GCA_003837625.1_ASM383762v1

♦ Seq 1: NSUI01000010.1 Pseudomonas aeruginosa strain C3128 IPC715_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 210256 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208993-209741 bp Zoom in on locus 1 x13 CRISPR array Location: 208993-209741 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 208993-209741 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208993-209741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSUI01000017.1 Pseudomonas aeruginosa strain C3128 IPC715_17.1, whole genome shotgun sequence

⇒Summary: seq-len = 49326 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38394-48813 bp Zoom in on locus 1 x16 x10 CRISPR array Location: 38394-39322 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 38394-39322 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 39505-40068 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40072-41100 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41111-42094 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42081-43382 bp Gene: COG1203:cas3 Type: Type-I Location: 43793-47023 bp Gene: cd09718:cas1 Type: universal Location: 47020-47994 bp CRISPR array Location: 48246-48813 bp Num of repeats: 10 Spacers: s16-s24 CRISPR array Location: 48246-48813 bp Num of repeats: 10 Spacers: s16-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38394-39322 bp]: array | spacers
           [Locus range 48246-48813 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)