CRISPRone

CRISPRone report for GCA_003837645.1_ASM383764v1

♦ Seq 1: NSUZ01000003.1 Pseudomonas aeruginosa strain A9 IPC688_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 951493 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 899722-899930 bp Zoom in on locus 1 x4 CRISPR array Location: 899722-899930 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 899722-899930 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 899722-899930 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSUZ01000012.1 Pseudomonas aeruginosa strain A9 IPC688_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 159945 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8175-8562 bp Zoom in on locus 1 x7 CRISPR array Location: 8175-8562 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 8175-8562 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8175-8562 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NSUZ01000019.1 Pseudomonas aeruginosa strain A9 IPC688_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 78134 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 30058-40321 bp Zoom in on locus 1 x9 x19 CRISPR array Location: 30058-30566 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 30058-30566 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09718:cas1 Type: universal Location: 30827-31801 bp Gene: COG1203:cas3 Type: Type-I Location: 31798-35028 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 35086-36390 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36377-37423 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37434-38462 bp Gene: cd09739:cas6f Type: other Location: 38466-39029 bp CRISPR array Location: 39213-40321 bp Num of repeats: 19 Spacers: s9-s26 CRISPR array Location: 39213-40321 bp Num of repeats: 19 Spacers: s9-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 30058-30566 bp]: array | spacers
           [Locus range 39213-40321 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)