CRISPRone

CRISPRone report for GCA_003837725.1_ASM383772v1

♦ Seq 1: NSUT01000019.1 Pseudomonas aeruginosa strain A19 IPC694_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 50904 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 304-12292 bp Zoom in on locus 1 x23 x29 CRISPR array Location: 304-1654 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 304-1654 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 1914-2888 bp Gene: COG1203:cas3 Type: Type-I Location: 2885-6115 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6526-7827 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7814-8797 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8808-9836 bp Gene: cd09739:cas6f Type: other Location: 9840-10403 bp CRISPR array Location: 10588-12292 bp Num of repeats: 29 Spacers: s23-s50 CRISPR array Location: 10588-12292 bp Num of repeats: 29 Spacers: s23-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 304-1654 bp]: array | spacers
           [Locus range 10588-12292 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSUT01000012.1 Pseudomonas aeruginosa strain A19 IPC694_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 208537 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 304-933 bp Zoom in on locus 1 x11 CRISPR array Location: 304-933 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 304-933 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 304-933 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)